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2018


Gerner SM, Rattei T, Graf AB. Assessment of urban microbiome assemblies with the help of targeted in silico gold standards. Biology direct. 2018 Oct 12;13(1):22. 22. doi: 10.1186/s13062-018-0225-6

Vázquez-Castellanos JF, Serrano-Villar S, Jiménez-Hernández N, Soto Del Rio MD, Gayo S, Rojo D et al. Interplay between gut microbiota metabolism and inflammation in HIV infection. The ISME Journal: multidisciplinary journal of microbial ecology. 2018 Aug;12(8):1964-1976. doi: 10.1038/s41396-018-0151-8

Maixner F, Turaev D, Cazenave-Gassiot A, Janko M, Krause-Kyora B, Hoopmann MR et al. The Iceman's Last Meal Consisted of Fat, Wild Meat, and Cereals. Current Biology. 2018 Jul 23;28(14):2348-2355.e9. doi: 10.1016/j.cub.2018.05.067

Genome Standards Consortium, Schirmi L, Banfield JF, Hugenholtz P, Woyke T. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 2018 Jul 6;36(7):660-660. 660. doi: 10.1038/nbt0718-660a

Hausmann B, Pelikan C, Herbold CW, Köstlbacher S, Albertsen M, Eichorst SA et al. Peatland Acidobacteria with a dissimilatory sulfur metabolism. The ISME Journal: multidisciplinary journal of microbial ecology. 2018 Jul;12(7):1729–1742. Epub 2018 Feb 23. doi: 10.1038/s41396-018-0077-1

Laffy PW, Wood-Charlson EM, Turaev D, Jutz S, Pascelli C, Botté ES et al. Reef invertebrate viromics: diversity, host specificity and functional capacity. Environmental Microbiology. 2018 Jun;20(6):2125-2141. doi: 10.1111/1462-2920.14110

Haselmair-Gosch C, Miosic S, Nitarska D, Roth BL, Walliser B, Paltram R et al. Great Cause-Small Effect: Undeclared Genetically Engineered Orange Petunias Harbor an Inefficient Dihydroflavonol 4-Reductase. Frontiers in Plant Science. 2018 Feb 28;9:149. doi: 10.3389/fpls.2018.00149

Felkel S, Vogl C, Rigler D, Jagannathan V, Leeb T, Fries R et al. Asian horses deepen the MSY phylogeny. Animal genetics. 2018 Feb;49(1):90-93. doi: 10.1111/age.12635

Shima K, Wanker M, Skilton RJ, Cutcliffe LT, Schnee C, Kohl TA et al. The Genetic Transformation of Chlamydia pneumoniae. mSphere. 2018;3(5):e00412-18. doi: 10.1128/mSphere.00412-18

2017


Käding N, Kaufhold I, Müller C, Szaszák M, Shima K, Weinmaier T et al. Growth of Chlamydia pneumoniae Is Enhanced in Cell swith Impaired Mitochondrial Function. Frontiers in Cellular and Infection Microbiology. 2017 Dec 5;7:499. doi: 10.3389/fcimb.2017.00499

Eder T, Kobus S, Stallmann S, Stepanow S, Köhrer K, Hegemann JH et al. Genome sequencing of Chlamydia trachomatis serovars E and F reveals substantial genetic variation. Pathogens and Disease. 2017 Dec;75(9):ftx120. Epub 2017 Nov 24. doi: 10.1093/femspd/ftx120

Sczyrba A, Hofmann P, Belmann P, Koslicki D, Janssen S, Dröge J et al. Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software. Nature Methods. 2017 Oct 2;14(11):1063-1071. Epub 2017. doi: 10.1038/nmeth.4458

Walker A, Pfitzner B, Harir M, Schaubeck M, Calasan J, Heinzmann SS et al. Sulfonolipids as novel metabolite markers of Alistipes and Odoribacter affected by high-fat diets. Scientific Reports. 2017 Sep 8;7:11047. doi: 10.1038/s41598-017-10369-z

Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK et al. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 2017 Aug 8;35(8):725-731. doi: 10.1038/nbt.3893

Thannesberger J, Hellinger H-J, Klymiuk I, Kastner M-T, Rieder FJJ, Schneider M et al. Viruses comprise an extensive pool of mobile genetic elements in eukaryote cell cultures and human clinical samples. The FASEB Journal. 2017 May 1;31(5):1987-2000. Epub 2017 Feb 8. doi: 10.1096/fj.201601168R

Zojer M, Schuster LN, Schulz F, Pfundner A, Horn M, Rattei T. Variant profiling of evolving prokaryotic populations. PeerJ. 2017 Feb 16;5:e2997. doi: 10.7717/peerj.2997

Loy A, Pfann C, Steinberger M, Hanson B, Herp S, Brugiroux S et al. Lifestyle and Horizontal Gene Transfer-Mediated Evolution of Mucispirillum schaedleri, a Core Member of the Murine Gut Microbiota. mSystems. 2017 Feb 9;2(1):00171-16. doi: 10.1128/mSystems.00171-16

Di Giglio MG, Muttenthaler M, Harpsøe K, Liutkeviciute Z, Keov P, Eder T et al. Development of a human vasopressin V1a-receptor antagonist from an evolutionary-related insect neuropeptide. Scientific Reports. 2017 Feb 1;7:41002. doi: 10.1038/srep41002