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2019


Lucaciu R, Pelikan C, Gerner SM, Zioutis C, Köstlbacher S, Marx H et al. A Bioinformatics Guide to Plant Microbiome Analysis. Frontiers in Plant Science. 2019 Oct 23;10:1313. doi: 10.3389/fpls.2019.01313

Moeller FU, Webster NS, Herbold CW, Behnam F, Domman D, Albertsen M et al. Characterization of a thaumarchaeal symbiont that drives incomplete nitrification in the tropical sponge Ianthella basta. Environmental Microbiology. 2019 Oct;21(10):3831-3854. doi: 10.1111/1462-2920.14732

Steiner PA, Mena C, De Corte D, Geijo J, Yokokawa T, Rattei T et al. Highly variable mRNA half-life time within marine bacterial taxa and functional genes. Environmental Microbiology. 2019 Oct;21(10):3873-3884. Epub 2019 Jul 12. doi: 10.1111/1462-2920.14737

Laffy PW, Botté ES, Wood-Charlson EM, Weynberg KD, Rattei T, Webster NS. Thermal stress modifies the marine sponge virome. Environmental Microbiology Reports. 2019 Oct;11(5):690-698. Epub 2019 Jul 8. doi: 10.1111/1758-2229.12782

Dos Santos-Pinto JRA, Esteves FG, Sialana FJ, Ferro M, Smidak R, Rares LC et al. A proteotranscriptomic study of silk-producing glands from the orb-weaving spiders. Molecular Omics. 2019 Aug 5;15(4):256-270. doi: 10.1039/c9mo00087a

Sialana FJ, Ribeiroda Silva Menegasso A, Smidak R, Hussein AM, Zavadil M, Rattei T et al. Proteome Changes Paralleling the Olfactory Conditioning in the Forager Honey Bee and Provision of a Brain Proteomics Dataset. Proteomics. 2019 Jul;19(13):e1900094. doi: 10.1002/pmic.201900094

Kiening M, Ochsenreiter R, Hellinger H-J, Rattei T, Hofacker I, Frishman D. Conserved Secondary Structures in Viral mRNAs. Viruses. 2019 Apr 29;11(5):401. doi: 10.3390/v11050401

Felkel S, Vogl C, Rigler D, Dobretsberger V, Chowdhary BP, Distl O et al. The horse Y chromosome as an informative marker for tracing sire lines. Scientific Reports. 2019 Apr 15;9(1):6095. doi: 10.1038/s41598-019-42640-w

Mahnert A, Moissl-Eichinger C, Zojer M, Bogumil D, Mizrahi I, Rattei T et al. Man-made microbial resistances in built environments. Nature Communications. 2019 Feb 27;10(1):968. doi: 10.1038/s41467-019-08864-0

Hausmann B, Pelikan C, Rattei T, Loy A, Pester M. Long-Term Transcriptional Activity at Zero Growth of a Cosmopolitan Rare Biosphere Member. mBio. 2019 Feb 12;10(1):e02189-18. doi: 10.1128/mBio.02189-18

Wally N, Schneider M, Thannesberger J, Kastner MT, Bakonyi T, Indik S et al. Plasmid DNA contaminant in molecular reagents. Scientific Reports. 2019 Feb 7;9(1):1652. doi: 10.1038/s41598-019-38733-1

Huerta-Cepas J, Szklarczyk D, Heller D, Hernández-Plaza A, Forslund SK, Cook H et al. eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses. Nucleic Acids Research. 2019 Jan 8;47(D1):D309–D314. gky1085. Epub 2018 Nov 12. doi: 10.1093/nar/gky1085

Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, Krupovic M et al. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature Biotechnology. 2019 Jan 1;37(1):29-37. Epub 2018 Dec 17. doi: 10.1038/nbt.4306

2018


Hannemann L, Lucaciu CR, Sharma S, Rattei T, Mayer KFX, Gierl A et al. A promiscuous beta-glucosidase is involved in benzoxazinoid deglycosylation in Lamium galeobdolon. Phytochemistry. 2018 Dec;156:224-233. Epub 2018 Oct 15. doi: 10.1016/j.phytochem.2018.10.012

Liutkeviciute Z, Gil-Mansilla E, Eder T, Casillas-Perez B, Di Giglio MG, Muratspahic E et al. Oxytocin-like signaling in ants influences metabolic gene expression and locomotor activity. The FASEB Journal. 2018 Dec;32(12):6808-6821. doi: 10.1096/fj.201800443

Springer K, Sänger P-A, Moritz C, Felsl A, Rattei T, Fuchs TM. Insecticidal Toxicity of Yersinia frederiksenii Involves the Novel Enterotoxin YacT. Frontiers in Cellular and Infection Microbiology. 2018 Nov 14;8:392. doi: 10.3389/fcimb.2018.00392

Gerner SM, Rattei T, Graf AB. Assessment of urban microbiome assemblies with the help of targeted in silico gold standards. Biology direct. 2018 Oct 12;13(1):22. 22. doi: 10.1186/s13062-018-0225-6

Vázquez-Castellanos JF, Serrano-Villar S, Jiménez-Hernández N, Soto Del Rio MD, Gayo S, Rojo D et al. Interplay between gut microbiota metabolism and inflammation in HIV infection. The ISME Journal: multidisciplinary journal of microbial ecology. 2018 Aug;12(8):1964-1976. doi: 10.1038/s41396-018-0151-8

Maixner F, Turaev D, Cazenave-Gassiot A, Janko M, Krause-Kyora B, Hoopmann MR et al. The Iceman's Last Meal Consisted of Fat, Wild Meat, and Cereals. Current Biology. 2018 Jul 23;28(14):2348-2355.e9. doi: 10.1016/j.cub.2018.05.067