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News

Successful German Conference on Bioinformatics 2018 in Vienna

01.10.18

News

The German Conference on Bioinformatics (GCB) is an annual, international conference devoted to all areas of bioinformatics. This year, the Austrian Bioinformatics Platfom ATBI hosted the GCB and made it a big scientific and networking event for the ...
CUBE on segway tour through Vienna

29.05.18

Event

CUBE took a day off on May 28 and toured on segways through Vienna. We started in the first district, visited the Prater and the second district. We stopped at the Augarten and then turned into the 9th district in ...
Happy birthday, Gabi!

28.03.18

Personal

Today, Gabi Kaindl is celebrating her 60th birthday. Dear Gabi, we all congratulate and wish you all the best. Thanks for your great work and the continuous support in solving all the big and small CUBE issues every day...
CAMI paper published in Nature Methods

03.10.17

Publication

The paper about the first round of the "Critical Assessment of Metagenome Interpretation" (CAMI) challenge was published in Nature Methods. The challenge was organized and run by an international team, including Dmitrij Turaev and Thomas Rattei from CUBE.

That's not the ...
Harald Marx starts Computational Peptidomics Group at CUBE

21.08.17

Personal

Dr. Harald Marx is a Bioinformatician by training. During his PhD in Bernhard Kuster's Lab at TU Munich he developed tools and statistical approaches for proteogenomics and structural genome annotation. As a PostDoc fellow in Joshua Coon's lab at the University of ...
Symposium "Computational Approaches in Precision Medicine" Jul 27/28 in Vienna

27.07.17

Event

The CUBE team and the research focus "Computational Life Sciences" teamed up with David Kreil and Pawel Labaj (BOKU University) in organizing the symposium "Computational Approaches in Precision Medicine" Jul 27/28. The meeting takes place in the BIG lecture hall ...
- Symposium homepage
FIRST RELEASE OF 45 PICA MODELS READY FOR DOWNLOAD

12.06.17

News

The first release of 45 PICA models is available on this site in the Download area of our new website PhenDB. Brief instructions on the download page will enable you to install the PICA software and the models on a ...
- PhenDB
- PICA and model download
Dr. rer. nat. Thomas Eder

18.04.17

Personal

Thomas Eder has successfully defended his PhD thesis "Bioinformatic analysis of host-pathogen interactions in the light of second generation sequencing technologies". He was examined by Prof. Thomas Miethke, University of Heidelberg, Prof. Heinz Himmelbauer, BOKU University, and Prof. Arndt von Haeseler, ...
VarCap: a new method for genotyping of prokaryotic populations

12.03.17

Publication

We created VarCap, a fully automated workflow that allows scientists to rapidly predict variants within high coverage, short read paired end sequencing data. VarCap automatically performs quality filtering, mapping, variant calling and post-filtering of the predicted variants. VarCap can be ...
- VarCap server
- Publication
New website for Virus Orthologous Groups (VOG)

03.03.17

News

Along with the new release 80 of our Virus Orthologous Groups (VOG) we have launched a public webserver for VOGDB at http://vogdb.org. The server provides information about the VOG, interactive access to the data and a download area for ...
- VOGDB

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